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LiSiCA Description
LiSiCA (Ligand Similarity using Clique Algorithm) is a ligand-based virtual screening software that searches for 2D and 3D similarities between a reference compound and a database of target compounds which should be represented in a Mol2 format. The similarities are expressed using the Tanimoto coefficients and the target compounds are ranked accordingly. LiSiCA is also available as LiSiCA PyMOL plugin both on Linux and Windows operating systems.
A list below shows LiSiCA alternatives which were either selected by us or voted for by users. You can filter this list by tags and platforms

LiSiCA Alternatives

  • JChemPaint by The CDK Project

    JChemPaint is computer software, an molecule editor and file viewer for chemical structures using 2D computer graphics. It is free and open-source software, released under a GNU Lesser General...

    Tags: Chemistry Software, Free Chemistry Software, Chemistry Software For Linux, Free Educational Software
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    Tags: Physics Software, Chemistry Software
  • BKChem by Beda Kosata

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    Latest version of BKChem is 0.13.0 and it was released on 2009-02-23.

    Tags: Free Software Programmed In Python, Chemistry Software, Free Chemistry Software, Software That Uses Tk, Chemistry Software For Linux
  • ChemWindow by Bio-Rad

    ChemWindow is a chemical structure drawing and publishing program developed by Bio-Rad Laboratories, Inc. It was first developed by SoftShell International in the 1990s. Bio-Rad acquired this...

    Latest version of ChemWindow is 9.5 and it was released on 2012.

    Tags: Chemistry Software, Windows Software
  • ChemDraw by CambridgeSoft

    ChemDraw is a molecule editor first developed in 1985 by David A. Evans and Stewart Rubenstein (later by the cheminformatics company CambridgeSoft). The company was sold to PerkinElmer in the year...

    Latest version of ChemDraw is 16.0 and it was released on August 2016.

    Tags: Chemistry Software, Science Software For Macos, Science Software For Windows
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    ACD/ChemSketch is a molecular modeling program used to create and modify images of chemical structures. Also, there is a software that allows molecules and molecular models displayed in two and...

    Tags: Chemistry Software, Educational Software
  • ProBiS by Insilab (National Institute of Chemistry Slovenia)

    ProBiS is a computer software which allows prediction of binding sites and their corresponding ligands for a given protein structure. Initially ProBiS was developed as a ProBiS algorithm by Janez...

    Tags: Online Databases, Chemistry Software, Web Server Software
  • XDrawChem

    XDrawChem is a free software program for drawing chemical structural formulas, available for Unix and macOS. It is distributed under the GNU GPL. In Microsoft Windows this program is called...

    Latest version of XDrawChem is 1.9.9 and it was released on 2005-11-30.

    Tags: Chemistry Software, Free Science Software, Free Software Programmed In C, Free Software Programmed In Fortran, Science Software That Uses Qt, Chemistry Software For Linux
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    Massively Parallel Monte Carlo (MPMC) is an Monte Carlo method package primarily designed to simulate liquids, molecular interfaces, and functionalized nanoscale materials. It was developed...

    Tags: Monte Carlo Particle Physics Software, Science Software For Linux, Computational Physics, Monte Carlo Methods, Theoretical Chemistry, Stochastic Models, Molecular Modelling, Free Software Programmed In C
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    Latest version of MesoBioNano Studio is 3.0 and it was released on 2017-03-31.

    Tags: Molecular Modelling Software, Molecular Modelling, Physics Software
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    Folding@home (FAH or F@h) is a distributed computing project for disease research that simulates protein folding, computational drug design, and other types of molecular dynamics. The project uses...

    Latest version of Folding@home is 7.4.4 and it was released on 2014-03-19.

    Tags: Computerrelated Introductions In 2000, Bioinformatics, Computational Biology, Computational Chemistry, Crossplatform Software, Data Mining And Machine Learning Software, Distributed Computing Projects, Hidden Markov Models, Mathematical And Theoretical Biology, Molecular Dynamics Software, Molecular Modelling, Molecular Modelling Software, Playstation 3 Software, Proprietary Crossplatform Software, Protein Folds, Protein Structure, Simulation Software, Stanford University, Medical Technology, Medical Research Organizations, Science Software For Linux, Science Software For Macos, Science Software For Windows
  • TeraChem by PetaChem

    TeraChem is the first computational chemistry software program written completely from scratch to benefit from the new streaming processors such as graphics processing units (GPUs). The...

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    Tags: Molecular Modelling, Computational Chemistry, Computational Chemistry Software, Electronic Structure Methods
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    Scigress, stylized SCiGRESS, is a software suite for molecular modelling, computational chemistry, drug design, and materials science, a successor to Computer Aided Chemistry (CAChe)...

    Latest version of Scigress is 2.7(3.2) and it was released on {{Start date and age|2016|05}}.

    Tags: Molecular Modelling Software, Computational Chemistry, Molecular Modelling, Bioinformatics Software, Physics Software, Computational Chemistry Software
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    Biskit is an open source software package written in Python. The package facilitates research in Structural bioinformatics and molecular modelling. Biskit falls into two parts: * an Object-oriented...

    Tags: Bioinformatics Software, Molecular Modelling, Physics Software, Computational Chemistry Software, Free Science Software, Free Software Programmed In Python, Molecular Dynamics